Uses of Class
com.genologics.ri.artifact.Artifact

Packages that use Artifact

Package	Description
com.genologics.ri.artifact
com.genologics.ri.container
com.genologics.ri.process
com.genologics.ri.processexecution
com.genologics.ri.queue
com.genologics.ri.routing
com.genologics.ri.sample
com.genologics.ri.step
org.cruk.clarity.api	The main public package of the Clarity API.
org.cruk.clarity.api.impl	Concrete implementation classes of the Clarity API.

Uses of Artifact in com.genologics.ri.artifact

Fields in com.genologics.ri.artifact with type parameters of type Artifact

Modifier and Type	Field	Description
protected List<Artifact>	ArtifactBatchFetchResult.artifacts

Methods in com.genologics.ri.artifact that return Artifact

Modifier and Type	Method	Description
Artifact	ObjectFactory.createArtifact()

Methods in com.genologics.ri.artifact that return types with arguments of type Artifact

Modifier and Type	Method	Description
javax.xml.bind.JAXBElement<Artifact>	ObjectFactory.createArtifact(Artifact value)
List<Artifact>	ArtifactBatchFetchResult.getArtifacts()
Class<Artifact>	ArtifactLink.getEntityClass()
Class<Artifact>	DemuxSourceArtifact.getEntityClass()
List<Artifact>	ArtifactBatchFetchResult.getList()
Iterator<Artifact>	ArtifactBatchFetchResult.iterator()

Methods in com.genologics.ri.artifact with parameters of type Artifact

Modifier and Type	Method	Description
javax.xml.bind.JAXBElement<Artifact>	ObjectFactory.createArtifact(Artifact value)

Method parameters in com.genologics.ri.artifact with type arguments of type Artifact

Modifier and Type	Method	Description
void	ArtifactBatchFetchResult.addForCreate(Collection<Artifact> entities)
void	ArtifactBatchFetchResult.addForUpdate(Collection<Artifact> entities)
void	DemuxSourceArtifact.setArtifact(Linkable<Artifact> artifact)

Constructor parameters in com.genologics.ri.artifact with type arguments of type Artifact

Modifier	Constructor	Description
	ArtifactBatchFetchResult(Collection<Artifact> artifacts)
	ArtifactLink(LimsEntityLinkable<Artifact> link)

Uses of Artifact in com.genologics.ri.container

Methods in com.genologics.ri.container that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	Placement.getEntityClass()

Method parameters in com.genologics.ri.container with type arguments of type Artifact

Modifier and Type	Method	Description
Placement	Container.addPlacement(LimsEntityLinkable<Artifact> artifact, String wellPosition)
void	Container.setPlacements(Collection<? extends LimsEntityLinkable<Artifact>> links)

Constructor parameters in com.genologics.ri.container with type arguments of type Artifact

Modifier	Constructor	Description
	Placement(LimsEntityLinkable<Artifact> link)
	Placement(LimsEntityLinkable<Artifact> link, String wellPosition)

Uses of Artifact in com.genologics.ri.process

Methods in com.genologics.ri.process that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	ArtifactLink.getEntityClass()

Method parameters in com.genologics.ri.process with type arguments of type Artifact

Modifier and Type	Method	Description
void	InputOutputMap.setInput(LimsEntityLinkable<Artifact> link)
void	InputOutputMap.setInput(Linkable<Artifact> link)
void	InputOutputMap.setOutput(LimsEntityLinkable<Artifact> link)
void	InputOutputMap.setOutput(Linkable<Artifact> link)

Constructor parameters in com.genologics.ri.process with type arguments of type Artifact

Modifier	Constructor	Description
	ArtifactLink(LimsEntityLinkable<Artifact> link)
	ArtifactLink(Linkable<Artifact> link)
	InputOutputMap(LimsEntityLinkable<Artifact> input, LimsEntityLinkable<Artifact> output)
	InputOutputMap(Linkable<Artifact> input, Linkable<Artifact> output)

Uses of Artifact in com.genologics.ri.processexecution

Methods in com.genologics.ri.processexecution that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	Input.getEntityClass()

Method parameters in com.genologics.ri.processexecution with type arguments of type Artifact

Modifier and Type	Method	Description
Input	ExecutableInputOutputMap.addInput(Linkable<Artifact> link, QCFlag qc)
void	ExecutableInputOutputMap.setInputs(Collection<? extends Linkable<Artifact>> links)
protected void	ArtifactBase.updateQCFlag(Linkable<Artifact> link)

Constructor parameters in com.genologics.ri.processexecution with type arguments of type Artifact

Modifier	Constructor	Description
	Input(Linkable<Artifact> link)

Uses of Artifact in com.genologics.ri.queue

Methods in com.genologics.ri.queue that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	ArtifactLink.getEntityClass()

Uses of Artifact in com.genologics.ri.routing

Methods in com.genologics.ri.routing that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	ArtifactLink.getEntityClass()

Method parameters in com.genologics.ri.routing with type arguments of type Artifact

Modifier and Type	Method	Description
void	ExtArtifactAssignments.addAll(Collection<? extends Linkable<Artifact>> links)
void	ExtArtifactAssignments.addArtifact(Linkable<Artifact> artifact)

Constructor parameters in com.genologics.ri.routing with type arguments of type Artifact

Modifier	Constructor	Description
	ArtifactLink(Linkable<Artifact> link)

Uses of Artifact in com.genologics.ri.sample

Methods in com.genologics.ri.sample that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	ArtifactLink.getEntityClass()

Method parameters in com.genologics.ri.sample with type arguments of type Artifact

Modifier and Type	Method	Description
void	SampleBase.setArtifact(LimsEntityLinkable<Artifact> artifact)

Constructor parameters in com.genologics.ri.sample with type arguments of type Artifact

Modifier	Constructor	Description
	ArtifactLink(LimsEntityLinkable<Artifact> link)

Uses of Artifact in com.genologics.ri.step

Methods in com.genologics.ri.step that return types with arguments of type Artifact

Modifier and Type	Method	Description
Class<Artifact>	ArtifactLink.getEntityClass()
Class<Artifact>	CreationInput.getEntityClass()
Class<Artifact>	EscalatedArtifact.getEntityClass()
Class<Artifact>	Input.getEntityClass()
Class<Artifact>	NextAction.getEntityClass()
Class<Artifact>	Output.getEntityClass()
Class<Artifact>	OutputPlacement.getEntityClass()
Class<Artifact>	SharedResultFile.getEntityClass()

Method parameters in com.genologics.ri.step with type arguments of type Artifact

Modifier and Type	Method	Description
Input	Pools.addAvailableInput(Linkable<Artifact> artifact)
EscalatedArtifact	Escalation.addEscalatedArtifact(Linkable<Artifact> link)
Input	PooledInputs.addInput(Linkable<Artifact> artifact)
CreationInput	StepCreation.addInput(Linkable<Artifact> artifact, Linkable<ControlType> controlType, Long replicates)
InputOutputMap	StepDetails.addInputOutputMap(LimsEntityLinkable<Artifact> input, LimsEntityLinkable<Artifact> output)
OutputPlacement	Placements.addOutputPlacement(Linkable<Artifact> artifact, Linkable<Container> container, String wellPosition)
PooledInputs	Pools.addPooledInputs(Collection<? extends Linkable<Artifact>> inputArtifacts, String poolName, Linkable<Artifact> outputArtifact)
PooledInputs	Pools.addPooledInputs(Collection<? extends Linkable<Artifact>> inputArtifacts, String poolName, Linkable<Artifact> outputArtifact)
void	CreationInput.setArtifact(Linkable<Artifact> a)
void	NextAction.setArtifact(Linkable<Artifact> link)
void	Output.setArtifact(Linkable<Artifact> artifact)
void	OutputPlacement.setArtifact(Linkable<Artifact> artifact)
void	InputOutputMap.setInput(LimsEntityLinkable<Artifact> link)
void	InputOutputMap.setInput(Linkable<Artifact> link)
void	PooledInputs.setInputArtifacts(Collection<? extends Linkable<Artifact>> artifacts)
void	InputOutputMap.setOutput(LimsEntityLinkable<Artifact> link)
void	InputOutputMap.setOutput(Linkable<Artifact> link)
void	PooledInputs.setOutputArtifact(Linkable<Artifact> artifact)

Constructor parameters in com.genologics.ri.step with type arguments of type Artifact

Modifier	Constructor	Description
	ArtifactLink(LimsEntityLinkable<Artifact> link)
	ArtifactLink(Linkable<Artifact> link)
	CreationInput(Linkable<Artifact> artifact)
	CreationInput(Linkable<Artifact> artifact, Linkable<ControlType> controlType)
	CreationInput(Linkable<Artifact> artifact, Linkable<ControlType> controlType, Long replicates)
	EscalatedArtifact(Linkable<Artifact> link)
	Input(Linkable<Artifact> link)
	InputOutputMap(LimsEntityLinkable<Artifact> input, LimsEntityLinkable<Artifact> output)
	InputOutputMap(Linkable<Artifact> input, Linkable<Artifact> output)
	NextAction(Linkable<Artifact> link)
	NextAction(Linkable<Artifact> link, ActionType action)
	NextAction(Linkable<Artifact> link, ActionType action, Linkable<ProtocolStep> nextStep)
	OutputPlacement(Linkable<Artifact> artifact)
	OutputPlacement(Linkable<Artifact> artifact, LimsEntityLinkable<Container> container, String wellPosition)
	OutputPlacement(Linkable<Artifact> artifact, Linkable<Container> container, String wellPosition)
	PooledInputs(Collection<? extends Linkable<Artifact>> inputArtifacts, String poolName)
	PooledInputs(Collection<? extends Linkable<Artifact>> inputArtifacts, String poolName, Linkable<Artifact> outputArtifact)
	PooledInputs(Collection<? extends Linkable<Artifact>> inputArtifacts, String poolName, Linkable<Artifact> outputArtifact)
	SharedResultFile(LimsEntityLinkable<Artifact> link)

Uses of Artifact in org.cruk.clarity.api

Methods in org.cruk.clarity.api that return types with arguments of type Artifact

Modifier and Type	Method	Description
List<LimsEntityLink<Artifact>>	ClarityAPI.listQueue(Linkable<ProtocolStep> protocolStep)	List the artifacts in the queue for the given protocol step.
List<LimsEntityLink<Artifact>>	ClarityAPI.listQueue(Linkable<ProtocolStep> protocolStep, Map<String,?> searchTerms)	List the artifacts in the queue for the given protocol step, additionally filtering using the parameters available for the "queues" end point.

Uses of Artifact in org.cruk.clarity.api.impl

Methods in org.cruk.clarity.api.impl that return types with arguments of type Artifact

Modifier and Type	Method	Description
List<LimsEntityLink<Artifact>>	ClarityAPIImpl.listQueue(Linkable<ProtocolStep> protocolStep)	List the artifacts in the queue for the given protocol step.
List<LimsEntityLink<Artifact>>	ClarityAPIImpl.listQueue(Linkable<ProtocolStep> protocolStep, Map<String,?> searchTerms)	List the artifacts in the queue for the given protocol step, additionally filtering using the parameters available for the "queues" end point.