Serialized Form

Package com.genologics.ri

Class com.genologics.ri.Address

class Address extends Object implements Serializable

serialVersionUID:

5343736859063068514L

Serialized Fields

city

String city

country

String country

department

String department

institution

String institution

postalCode

String postalCode

state

String state

street

String street

Class com.genologics.ri.ContainerLink

class ContainerLink extends Object implements Serializable

serialVersionUID:

4920381830737280136L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.ExternalId

class ExternalId extends Object implements Serializable

serialVersionUID:

-6268759708863731052L

Serialized Fields

id

URI id

uri

URI uri

Class com.genologics.ri.Index

class Index extends Object implements Serializable

serialVersionUID:

-458228684534981324L

Serialized Fields

links

List<Link> links

Class com.genologics.ri.Link

class Link extends Object implements Serializable

serialVersionUID:

7144458168274015747L

Serialized Fields

relative

String relative

uri

URI uri

Class com.genologics.ri.Links

class Links extends Object implements Serializable

serialVersionUID:

8838137119064380847L

Serialized Fields

linkList

List<Link> linkList

Class com.genologics.ri.Location

class Location extends Object implements Serializable

serialVersionUID:

-2461753783129402323L

Serialized Fields

container

ContainerLink container

wellPosition

String wellPosition

Class com.genologics.ri.Page

class Page extends Object implements Serializable

serialVersionUID:

-5699038454764689725L

Serialized Fields

uri

URI uri

Package com.genologics.ri.artifact

Class com.genologics.ri.artifact.Artifact

class Artifact extends Object implements Serializable

serialVersionUID:

4667019853212119178L

Serialized Fields

artifactGroups

List<ArtifactGroupLink> artifactGroups

controlType

ControlTypeLink controlType

demux

DemuxLink demux

Since:

2.26

fields

List<UDF> fields

file

ClarityFile file

limsid

String limsid

location

Location location

name

String name

outputType

OutputType outputType

parentProcess

ParentProcessLink parentProcess

qcFlag

QCFlag qcFlag

reagentLabels

List<ReagentLabel> reagentLabels

samples

List<SampleLink> samples

type

String type

uri

URI uri

workflowStages

List<WorkflowStage> workflowStages

Since:

2.20

workingFlag

Boolean workingFlag

Class com.genologics.ri.artifact.ArtifactBatchFetchResult

class ArtifactBatchFetchResult extends Object implements Serializable

serialVersionUID:

-1280235468943933621L

Serialized Fields

artifacts

List<Artifact> artifacts

Class com.genologics.ri.artifact.ArtifactGroupLink

class ArtifactGroupLink extends Object implements Serializable

serialVersionUID:

3815644574567253825L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.artifact.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

-7338824559555981618L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.artifact.Artifacts

class Artifacts extends Object implements Serializable

serialVersionUID:

2523274106664095426L

Serialized Fields

artifacts

List<ArtifactLink> artifacts

nextPage

Page nextPage

previousPage

Page previousPage

Class com.genologics.ri.artifact.ControlTypeLink

class ControlTypeLink extends Object implements Serializable

serialVersionUID:

-4203696627970925073L

Serialized Fields

uri

URI uri

Class com.genologics.ri.artifact.Demux

class Demux extends Object implements Serializable

serialVersionUID:

8873892961025197978L

Serialized Fields

artifact

DemuxSourceArtifact artifact

demuxDetails

DemuxDetails demuxDetails

uri

URI uri

Class com.genologics.ri.artifact.DemuxArtifact

class DemuxArtifact extends Object implements Serializable

serialVersionUID:

8205564798487086835L

Serialized Fields

demux

DemuxDetails demux

name

String name

reagentLabels

List<ReagentLabel> reagentLabels

samples

List<DemuxArtifactSample> samples

uri

URI uri

Class com.genologics.ri.artifact.DemuxArtifactSample

class DemuxArtifactSample extends Object implements Serializable

serialVersionUID:

7139520312009522858L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.artifact.DemuxDetails

class DemuxDetails extends Object implements Serializable

serialVersionUID:

-6725351237693935651L

Serialized Fields

artifacts

List<DemuxArtifact> artifacts

poolStep

PoolStep poolStep

Class com.genologics.ri.artifact.DemuxLink

class DemuxLink extends Object implements Serializable

serialVersionUID:

-3140263256856604670L

Serialized Fields

uri

URI uri

Class com.genologics.ri.artifact.DemuxSourceArtifact

class DemuxSourceArtifact extends Object implements Serializable

serialVersionUID:

-3058956251238626047L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.artifact.ParentProcessLink

class ParentProcessLink extends Object implements Serializable

serialVersionUID:

-4561570030979835552L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.artifact.PoolStep

class PoolStep extends Object implements Serializable

serialVersionUID:

2462830072429085619L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.artifact.ReagentLabel

class ReagentLabel extends Object implements Serializable

serialVersionUID:

7859734987217470470L

Serialized Fields

name

String name

Class com.genologics.ri.artifact.SampleLink

class SampleLink extends Object implements Serializable

serialVersionUID:

-7708212302820162281L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.artifact.WorkflowStage

class WorkflowStage extends Object implements Serializable

serialVersionUID:

8029803456211993608L

Serialized Fields

name

String name

status

Status status

uri

URI uri

Package com.genologics.ri.artifactgroup

Class com.genologics.ri.artifactgroup.ArtifactGroup

class ArtifactGroup extends Object implements Serializable

serialVersionUID:

2205878179459911556L

Serialized Fields

artifacts

Artifacts artifacts

name

String name

uri

URI uri

Class com.genologics.ri.artifactgroup.ArtifactGroupLink

class ArtifactGroupLink extends Object implements Serializable

serialVersionUID:

3168021328679428589L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.artifactgroup.ArtifactGroups

class ArtifactGroups extends Object implements Serializable

serialVersionUID:

2682947388238084051L

Serialized Fields

artifactGroups

List<ArtifactGroupLink> artifactGroups

nextPage

Page nextPage

previousPage

Page previousPage

Class com.genologics.ri.artifactgroup.Artifacts

class Artifacts extends Object implements Serializable

serialVersionUID:

-2118023404939650487L

Serialized Fields

uri

URI uri

Package com.genologics.ri.automation

Class com.genologics.ri.automation.Automation

class Automation extends Object implements Serializable

serialVersionUID:

8888968017373728807L

Serialized Fields

channel

String channel

context

Context context

files

List<ClarityFile> files

name

String name

processTypes

List<ProcessTypeLink> processTypes

runProgramPerEvent

Boolean runProgramPerEvent

script

String script

uri

URI uri

Class com.genologics.ri.automation.AutomationLink

class AutomationLink extends Object implements Serializable

serialVersionUID:

3268594731404978793L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.automation.Automations

class Automations extends Object implements Serializable

serialVersionUID:

-3048084395718929498L

Serialized Fields

automations

List<AutomationLink> automations

nextPage

Page nextPage

previousPage

Page previousPage

uri

URI uri

Class com.genologics.ri.automation.ProcessTypeLink

class ProcessTypeLink extends Object implements Serializable

serialVersionUID:

1189833674343873526L

Serialized Fields

name

String name

uri

URI uri

Package com.genologics.ri.configuration

Class com.genologics.ri.configuration.Field

class Field extends Object implements Serializable

serialVersionUID:

-60457662591218753L

Serialized Fields

allowNonPresetValues

Boolean allowNonPresetValues

attachToCategory

String attachToCategory

attachToName

String attachToName

childUris

List<String> childUris

controlledVocabulary

Boolean controlledVocabulary

deviation

Boolean deviation

editable

Boolean editable

firstPresetIsDefaultValue

Boolean firstPresetIsDefaultValue

maxValue

Double maxValue

minValue

Double minValue

name

String name

parentUri

URI parentUri

precision

Integer precision

presets

List<String> presets

required

Boolean required

showInLablink

Boolean showInLablink

showInTables

Boolean showInTables

type

FieldType type

typeDefinition

TypeDefinition typeDefinition

unitLabel

String unitLabel

uri

URI uri

Class com.genologics.ri.configuration.FieldLink

class FieldLink extends Object implements Serializable

serialVersionUID:

5031274064780081067L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.configuration.Type

class Type extends Object implements Serializable

serialVersionUID:

6975337629090720371L

Serialized Fields

attachToCategory

String attachToCategory

attachToName

String attachToName

fieldDefinitions

List<FieldLink> fieldDefinitions

name

String name

uri

URI uri

Class com.genologics.ri.configuration.TypeDefinition

class TypeDefinition extends Object implements Serializable

serialVersionUID:

7368802583367288257L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.configuration.UdfConfigLink

class UdfConfigLink extends Object implements Serializable

serialVersionUID:

-164190204904044681L

Serialized Fields

attachToCategory

String attachToCategory

attachToName

String attachToName

name

String name

uri

URI uri

Class com.genologics.ri.configuration.Udfs

class Udfs extends Object implements Serializable

serialVersionUID:

-5458422132487888319L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

udfConfigLinks

List<UdfConfigLink> udfConfigLinks

Class com.genologics.ri.configuration.UdtConfigLink

class UdtConfigLink extends Object implements Serializable

serialVersionUID:

-9221186839753173309L

Serialized Fields

attachToCategory

String attachToCategory

attachToName

String attachToName

name

String name

uri

URI uri

Class com.genologics.ri.configuration.Udts

class Udts extends Object implements Serializable

serialVersionUID:

-3512684674322879203L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

udtConfigLinks

List<UdtConfigLink> udtConfigLinks

Package com.genologics.ri.container

Class com.genologics.ri.container.Container

class Container extends Object implements Serializable

serialVersionUID:

-5274665844559069140L

Serialized Fields

containerType

ContainerTypeLink containerType

fields

List<UDF> fields

limsid

String limsid

name

String name

occupiedWells

Long occupiedWells

placements

List<Placement> placements

state

ContainerState state

Container state. Note this has changed from a string to an enum from release 2.31.6.

type

UDT type

uri

URI uri

Class com.genologics.ri.container.ContainerBatchFetchResult

class ContainerBatchFetchResult extends Object implements Serializable

serialVersionUID:

3942410984112211790L

Serialized Fields

containers

List<Container> containers

Class com.genologics.ri.container.ContainerLink

class ContainerLink extends Object implements Serializable

serialVersionUID:

-3079266542140961317L

Serialized Fields

limsid

String limsid

name

String name

uri

URI uri

Class com.genologics.ri.container.Containers

class Containers extends Object implements Serializable

serialVersionUID:

-1488050342582879623L

Serialized Fields

containers

List<ContainerLink> containers

nextPage

Page nextPage

previousPage

Page previousPage

Class com.genologics.ri.container.ContainerTypeLink

class ContainerTypeLink extends Object implements Serializable

serialVersionUID:

8897150572324942993L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.container.Placement

class Placement extends Object implements Serializable

serialVersionUID:

-4089394834813900531L

Serialized Fields

limsid

String limsid

uri

URI uri

wellPosition

String wellPosition

Package com.genologics.ri.containertype

Class com.genologics.ri.containertype.CalibrantWell

class CalibrantWell extends Object implements Serializable

serialVersionUID:

218110772739169852L

Serialized Fields

name

String name

Deprecated.

value

String value

Deprecated.

Class com.genologics.ri.containertype.ContainerType

class ContainerType extends Object implements Serializable

serialVersionUID:

-3778472967085446652L

Serialized Fields

calibrantWells

List<CalibrantWell> calibrantWells

Deprecated.

columns

Dimension columns

name

String name

rows

Dimension rows

tube

Boolean tube

unavailableWells

List<String> unavailableWells

uri

URI uri

Class com.genologics.ri.containertype.ContainerTypeLink

class ContainerTypeLink extends Object implements Serializable

serialVersionUID:

7125345264225985052L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.containertype.ContainerTypes

class ContainerTypes extends Object implements Serializable

serialVersionUID:

8642031910932251369L

Serialized Fields

containerTypes

List<ContainerTypeLink> containerTypes

nextPage

Page nextPage

previousPage

Page previousPage

Class com.genologics.ri.containertype.Dimension

class Dimension extends Object implements Serializable

serialVersionUID:

-1931190014491768673L

Serialized Fields

alpha

Boolean alpha

Whether numbering in this dimension is using letters (true) or numbers (false).

offset

Integer offset

size

Integer size

Package com.genologics.ri.controltype

Class com.genologics.ri.controltype.ControlType

class ControlType extends Object implements Serializable

serialVersionUID:

-3152986669595427342L

Serialized Fields

archived

Boolean archived

catalogueNumber

String catalogueNumber

concentration

String concentration

Since:

2.20

name

String name

singleStep

Boolean singleStep

supplier

String supplier

uri

URI uri

website

String website

Class com.genologics.ri.controltype.ControlTypeLink

class ControlTypeLink extends Object implements Serializable

serialVersionUID:

7850681628082855516L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.controltype.ControlTypes

class ControlTypes extends Object implements Serializable

serialVersionUID:

5668622843069816173L

Serialized Fields

controlTypes

List<ControlTypeLink> controlTypes

uri

URI uri

Package com.genologics.ri.exception

Class com.genologics.ri.exception.Exception

class Exception extends Object implements Serializable

serialVersionUID:

8552752622433159544L

Serialized Fields

category

String category

code

String code

message

String message

suggestedActions

String suggestedActions

Package com.genologics.ri.file

Class com.genologics.ri.file.ClarityFile

class ClarityFile extends Object implements Serializable

serialVersionUID:

-6683975101172687186L

Serialized Fields

attachedTo

URI attachedTo

contentLocation

URI contentLocation

limsid

String limsid

originalLocation

String originalLocation

originalName

String originalName

Since:

2.26

published

Boolean published

uri

URI uri

Class com.genologics.ri.file.ClarityFileBatchFetchResult

class ClarityFileBatchFetchResult extends Object implements Serializable

serialVersionUID:

-536166874357106044L

Serialized Fields

files

List<ClarityFile> files

Class com.genologics.ri.file.ClarityFiles

class ClarityFiles extends Object implements Serializable

serialVersionUID:

-1824449685486824569L

Serialized Fields

files

List<FileLink> files

nextPage

Page nextPage

previousPage

Page previousPage

Class com.genologics.ri.file.FileLink

class FileLink extends Object implements Serializable

serialVersionUID:

-2151598768590902010L

Serialized Fields

limsid

String limsid

uri

URI uri

Package com.genologics.ri.instrument

Class com.genologics.ri.instrument.Instrument

class Instrument extends Object implements Serializable

serialVersionUID:

1517557403395348841L

Serialized Fields

archived

Boolean archived

Since:

2.25

expiryDate

String expiryDate

Since:

2.25

limsid

String limsid

Since:

2.25

name

String name

serialNumber

String serialNumber

Since:

2.25

type

String type

uri

URI uri

Class com.genologics.ri.instrument.InstrumentLink

class InstrumentLink extends Object implements Serializable

serialVersionUID:

4463465224415870496L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.instrument.Instruments

class Instruments extends Object implements Serializable

serialVersionUID:

-525885513170744397L

Serialized Fields

instruments

List<InstrumentLink> instruments

nextPage

Page nextPage

previousPage

Page previousPage

Package com.genologics.ri.instrumenttype

Class com.genologics.ri.instrumenttype.InstrumentType

class InstrumentType extends Object implements Serializable

serialVersionUID:

7273963191417975L

Serialized Fields

name

String name

processTypes

List<InstrumentTypeProcessType> processTypes

uri

URI uri

vendor

String vendor

Class com.genologics.ri.instrumenttype.InstrumentTypeLink

class InstrumentTypeLink extends Object implements Serializable

serialVersionUID:

3927957034901059387L

Serialized Fields

name

String name

uri

URI uri

vendor

String vendor

Class com.genologics.ri.instrumenttype.InstrumentTypeProcessType

class InstrumentTypeProcessType extends Object implements Serializable

serialVersionUID:

89917917703984734L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.instrumenttype.InstrumentTypes

class InstrumentTypes extends Object implements Serializable

serialVersionUID:

1268811869773163450L

Serialized Fields

instrumentTypes

List<InstrumentTypeLink> instrumentTypes

nextPage

Page nextPage

Since:

2.31

previousPage

Page previousPage

Since:

2.31

Package com.genologics.ri.lab

Class com.genologics.ri.lab.Lab

class Lab extends Object implements Serializable

serialVersionUID:

8559819171292932068L

Serialized Fields

billingAddress

Address billingAddress

externalIds

List<ExternalId> externalIds

fields

List<UDF> fields

name

String name

shippingAddress

Address shippingAddress

type

UDT type

uri

URI uri

website

String website

Class com.genologics.ri.lab.LabLink

class LabLink extends Object implements Serializable

serialVersionUID:

5826900114630147822L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.lab.Labs

class Labs extends Object implements Serializable

serialVersionUID:

-2447458193812155143L

Serialized Fields

labs

List<LabLink> labs

nextPage

Page nextPage

previousPage

Page previousPage

Package com.genologics.ri.permission

Class com.genologics.ri.permission.Permission

class Permission extends Object implements Serializable

serialVersionUID:

5000872708185118382L

Serialized Fields

action

String action

description

String description

name

String name

uri

URI uri

Class com.genologics.ri.permission.PermissionLink

class PermissionLink extends Object implements Serializable

serialVersionUID:

-1000854973822260389L

Serialized Fields

action

String action

name

String name

uri

URI uri

Class com.genologics.ri.permission.Permissions

class Permissions extends Object implements Serializable

serialVersionUID:

-8403111885816697046L

Serialized Fields

permissions

List<PermissionLink> permissions

uri

String uri

Package com.genologics.ri.process

Class com.genologics.ri.process.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

5173462831311577367L

Serialized Fields

limsid

String limsid

outputGenerationType

OutputGenerationType outputGenerationType

outputType

OutputType outputType

parentProcess

ParentProcessLink parentProcess

postProcessUri

URI postProcessUri

uri

URI uri

Class com.genologics.ri.process.ClarityProcess

class ClarityProcess extends Object implements Serializable

serialVersionUID:

6767285324829996005L

Serialized Fields

dateRun

Date dateRun

fields

List<UDF> fields

files

List<ClarityFile> files

inputOutputMaps

List<InputOutputMap> inputOutputMaps

instrument

InstrumentLink instrument

limsid

String limsid

parameter

Parameter parameter

processType

ProcessTypeLink processType

protocolName

String protocolName

technician

Technician technician

type

UDT type

uri

URI uri

Class com.genologics.ri.process.ClarityProcesses

class ClarityProcesses extends Object implements Serializable

serialVersionUID:

-4214726592787580002L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

processes

List<ProcessLink> processes

Class com.genologics.ri.process.InputOutputMap

class InputOutputMap extends Object implements Serializable

serialVersionUID:

1174916419431443420L

Serialized Fields

input

ArtifactLink input

output

ArtifactLink output

Class com.genologics.ri.process.InstrumentLink

class InstrumentLink extends Object implements Serializable

serialVersionUID:

-5626088397896460506L

Serialized Fields

uri

URI uri

Class com.genologics.ri.process.Parameter

class Parameter extends Object implements Serializable

serialVersionUID:

3233972579407259573L

Serialized Fields

name

String name

Class com.genologics.ri.process.ParentProcessLink

class ParentProcessLink extends Object implements Serializable

serialVersionUID:

-6557381570589306115L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.process.ProcessLink

class ProcessLink extends Object implements Serializable

serialVersionUID:

6298646614909486599L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.process.ProcessTypeLink

class ProcessTypeLink extends Object implements Serializable

serialVersionUID:

1852325206868769788L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.process.Technician

class Technician extends Object implements Serializable

serialVersionUID:

7149503177948978718L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Package com.genologics.ri.processexecution

Class com.genologics.ri.processexecution.ArtifactBase

class ArtifactBase extends Object implements Serializable

serialVersionUID:

-946571040944446567L

Serialized Fields

qcFlag

QCFlag qcFlag

Class com.genologics.ri.processexecution.ExecutableInputOutputMap

class ExecutableInputOutputMap extends Object implements Serializable

serialVersionUID:

-5751963471358280360L

Serialized Fields

inputs

List<Input> inputs

output

Output output

shared

Boolean shared

Class com.genologics.ri.processexecution.ExecutableProcess

class ExecutableProcess extends Object implements Serializable

serialVersionUID:

-4582482597481524823L

Serialized Fields

dateRun

Date dateRun

fields

List<UDF> fields

inputOutputMaps

List<ExecutableInputOutputMap> inputOutputMaps

instrument

InstrumentLink instrument

parameter

Parameter parameter

processType

String processType

technician

Technician technician

type

UDT type

Class com.genologics.ri.processexecution.Input

class Input extends ArtifactBase implements Serializable

serialVersionUID:

-8366721361957628940L

Serialized Fields

uri

URI uri

Class com.genologics.ri.processexecution.InstrumentLink

class InstrumentLink extends Object implements Serializable

serialVersionUID:

7189991495122756369L

Serialized Fields

uri

URI uri

Class com.genologics.ri.processexecution.Output

class Output extends ArtifactBase implements Serializable

serialVersionUID:

-923589090274221714L

Serialized Fields

location

Location location

type

OutputType type

Class com.genologics.ri.processexecution.Parameter

class Parameter extends Object implements Serializable

serialVersionUID:

8161442493380982959L

Serialized Fields

name

String name

Class com.genologics.ri.processexecution.Technician

class Technician extends Object implements Serializable

serialVersionUID:

6342603327961394878L

Serialized Fields

uri

URI uri

Package com.genologics.ri.processtemplate

Class com.genologics.ri.processtemplate.InstrumentLink

class InstrumentLink extends Object implements Serializable

serialVersionUID:

-2255676271595073801L

Serialized Fields

uri

URI uri

Class com.genologics.ri.processtemplate.Parameter

class Parameter extends Object implements Serializable

serialVersionUID:

-8795139448974204288L

Serialized Fields

name

String name

Class com.genologics.ri.processtemplate.ProcessTemplate

class ProcessTemplate extends Object implements Serializable

serialVersionUID:

3219761173873030207L

Serialized Fields

defaultTemplate

Boolean defaultTemplate

fields

List<UDF> fields

instrument

InstrumentLink instrument

name

String name

parameter

Parameter parameter

processType

ProcessTypeLink processType

technician

Technician technician

type

UDT type

uri

URI uri

Class com.genologics.ri.processtemplate.ProcessTemplateLink

class ProcessTemplateLink extends Object implements Serializable

serialVersionUID:

-4745812706787102584L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtemplate.ProcessTemplates

class ProcessTemplates extends Object implements Serializable

serialVersionUID:

-1986524456179019901L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

processTemplates

List<ProcessTemplateLink> processTemplates

Class com.genologics.ri.processtemplate.ProcessTypeLink

class ProcessTypeLink extends Object implements Serializable

serialVersionUID:

-4446494931025385173L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtemplate.Technician

class Technician extends Object implements Serializable

serialVersionUID:

-8798198413338733052L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Package com.genologics.ri.processtype

Class com.genologics.ri.processtype.ContainerTypeLink

class ContainerTypeLink extends Object implements Serializable

serialVersionUID:

3628143663166434766L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtype.ControlTypeLink

class ControlTypeLink extends Object implements Serializable

serialVersionUID:

3029231159973544772L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtype.EppTrigger

class EppTrigger extends Object implements Serializable

serialVersionUID:

3481787346877063815L

Serialized Fields

name

String name

point

TriggerPoint point

status

TriggerStatus status

type

TriggerType type

Class com.genologics.ri.processtype.Field

class Field extends Object implements Serializable

serialVersionUID:

7870381376405702078L

Serialized Fields

attachTo

String attachTo

name

String name

style

Style style

Class com.genologics.ri.processtype.IceBucketField

class IceBucketField extends Field implements Serializable

serialVersionUID:

8915614372544937283L

Serialized Fields

detail

Boolean detail

Class com.genologics.ri.processtype.Parameter

class Parameter extends Object implements Serializable

serialVersionUID:

-803288179230938758L

Serialized Fields

channel

String channel

file

String file

Deprecated.

files

List<ClarityFile> files

Since:

2.26

invocationType

InvocationType invocationType

Deprecated.

name

String name

runProgramPerEvent

Boolean runProgramPerEvent

Deprecated.

script

String script

The EPP script text that will actually run.

Class com.genologics.ri.processtype.ProcessInput

class ProcessInput extends Object implements Serializable

serialVersionUID:

-2733188258573850043L

Serialized Fields

artifactType

String artifactType

displayName

String displayName

removeWorkingFlag

Boolean removeWorkingFlag

Deprecated.

Class com.genologics.ri.processtype.ProcessOutput

class ProcessOutput extends Object implements Serializable

serialVersionUID:

3584171153300804850L

Serialized Fields

artifactType

String artifactType

assignWorkingFlag

Boolean assignWorkingFlag

Deprecated.

displayName

String displayName

fieldDefinitions

List<FieldLink> fieldDefinitions

Deprecated.

numberOfOutputs

Integer numberOfOutputs

outputGenerationType

OutputGenerationType outputGenerationType

outputName

String outputName

variabilityType

VariabilityType variabilityType

Class com.genologics.ri.processtype.ProcessType

class ProcessType extends Object implements Serializable

serialVersionUID:

3103866326222677563L

Serialized Fields

eppTriggers

List<EppTrigger> eppTriggers

Since:

2.25

fieldDefinitions

List<FieldLink> fieldDefinitions

Deprecated.

iceBucketFields

List<IceBucketField> iceBucketFields

Since:

2.25

name

String name

parameters

List<Parameter> parameters

permittedContainers

List<ContainerTypeLink> permittedContainers

Since:

2.25

permittedControlTypes

List<ControlTypeLink> permittedControlTypes

Since:

2.25

permittedInstrumentTypes

List<String> permittedInstrumentTypes

Since:

2.25

permittedReagentCategories

List<String> permittedReagentCategories

Since:

2.25

processInputs

List<ProcessInput> processInputs

processOutputs

List<ProcessOutput> processOutputs

processTypeAttributes

List<ProcessTypeAttribute> processTypeAttributes

queueFields

List<QueueField> queueFields

queueFields

Since:

2.25

requiredReagentKits

List<ReagentKitLink> requiredReagentKits

Since:

2.25

sampleFields

List<Field> sampleFields

Since:

2.25

stepFields

List<Field> stepFields

Since:

2.25

stepProperties

List<StepProperty> stepProperties

Since:

2.25

stepSetup

StepSetup stepSetup

Since:

2.25

typeDefinitions

List<TypeDefinition> typeDefinitions

uri

URI uri

Class com.genologics.ri.processtype.ProcessTypeAttribute

class ProcessTypeAttribute extends Object implements Serializable

serialVersionUID:

2626426609413434344L

Serialized Fields

name

String name

value

String value

Class com.genologics.ri.processtype.ProcessTypeLink

class ProcessTypeLink extends Object implements Serializable

serialVersionUID:

5914216290949476076L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtype.ProcessTypes

class ProcessTypes extends Object implements Serializable

serialVersionUID:

747260766479912084L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

processTypes

List<ProcessTypeLink> processTypes

Class com.genologics.ri.processtype.QueueField

class QueueField extends Field implements Serializable

serialVersionUID:

2849413901300410668L

Serialized Fields

detail

Boolean detail

Class com.genologics.ri.processtype.ReagentKitLink

class ReagentKitLink extends Object implements Serializable

serialVersionUID:

7746715136563752804L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.processtype.SharedResultFile

class SharedResultFile extends Object implements Serializable

serialVersionUID:

-4934343881979066853L

Serialized Fields

message

String message

sharedResultFileIndex

String sharedResultFileIndex

Class com.genologics.ri.processtype.StepProperty

class StepProperty extends Object implements Serializable

serialVersionUID:

-4276491956024298591L

Serialized Fields

name

String name

value

String value

Class com.genologics.ri.processtype.StepSetup

class StepSetup extends Object implements Serializable

serialVersionUID:

2084961137587517113L

Serialized Fields

enabled

Boolean enabled

files

List<SharedResultFile> files

Class com.genologics.ri.processtype.TypeDefinition

class TypeDefinition extends Object implements Serializable

serialVersionUID:

2990437613974395091L

Serialized Fields

name

String name

uri

URI uri

Package com.genologics.ri.project

Class com.genologics.ri.project.Project

class Project extends Object implements Serializable

serialVersionUID:

-2194491709522434295L

Serialized Fields

closeDate

Date closeDate

externalIds

List<ExternalId> externalIds

fields

List<UDF> fields

files

List<ClarityFile> files

invoiceDate

Date invoiceDate

limsid

String limsid

name

String name

openDate

Date openDate

researcher

ResearcherLink researcher

type

UDT type

uri

URI uri

Class com.genologics.ri.project.ProjectLink

class ProjectLink extends Object implements Serializable

serialVersionUID:

5015998464762805841L

Serialized Fields

limsid

String limsid

name

String name

uri

URI uri

Class com.genologics.ri.project.Projects

class Projects extends Object implements Serializable

serialVersionUID:

-507792514854460064L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

projects

List<ProjectLink> projects

Class com.genologics.ri.project.ResearcherLink

class ResearcherLink extends Object implements Serializable

serialVersionUID:

-7754124824899651369L

Serialized Fields

uri

URI uri

Package com.genologics.ri.property

Class com.genologics.ri.property.Properties

class Properties extends Object implements Serializable

serialVersionUID:

-4193984606951017687L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

properties

List<PropertyLink> properties

Class com.genologics.ri.property.PropertyLink

class PropertyLink extends Object implements Serializable

serialVersionUID:

-6134863203392574429L

Serialized Fields

name

String name

uri

URI uri

value

String value

Package com.genologics.ri.protocolconfiguration

Class com.genologics.ri.protocolconfiguration.Protocol

class Protocol extends Object implements Serializable

serialVersionUID:

-8872729950204682764L

Serialized Fields

index

Integer index

name

String name

protocolProperties

List<ProtocolProperty> protocolProperties

steps

List<ProtocolStep> steps

uri

URI uri

Class com.genologics.ri.protocolconfiguration.ProtocolLink

class ProtocolLink extends Object implements Serializable

serialVersionUID:

5561496957381579448L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.protocolconfiguration.ProtocolProperty

class ProtocolProperty extends Object implements Serializable

serialVersionUID:

-2121684009872156372L

Serialized Fields

name

String name

value

String value

Class com.genologics.ri.protocolconfiguration.Protocols

class Protocols extends Object implements Serializable

serialVersionUID:

-586199251176099998L

Serialized Fields

protocols

List<ProtocolLink> protocols

Package com.genologics.ri.queue

Class com.genologics.ri.queue.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

-531351200403814712L

Serialized Fields

limsid

String limsid

location

Location location

queueTime

Date queueTime

uri

URI uri

Class com.genologics.ri.queue.Queue

class Queue extends Object implements Serializable

serialVersionUID:

4372664462524847744L

Serialized Fields

artifacts

List<ArtifactLink> artifacts

name

String name

nextPage

Page nextPage

previousPage

Page previousPage

protocolStepUri

URI protocolStepUri

uri

URI uri

Package com.genologics.ri.reagentkit

Class com.genologics.ri.reagentkit.ReagentKit

class ReagentKit extends Object implements Serializable

serialVersionUID:

7467244485974104986L

Serialized Fields

archived

Boolean archived

catalogueNumber

String catalogueNumber

name

String name

supplier

String supplier

uri

URI uri

website

String website

Class com.genologics.ri.reagentkit.ReagentKitLink

class ReagentKitLink extends Object implements Serializable

serialVersionUID:

-4850169731111210915L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.reagentkit.ReagentKits

class ReagentKits extends Object implements Serializable

serialVersionUID:

719305311109268363L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

reagentKits

List<ReagentKitLink> reagentKits

uri

URI uri

Package com.genologics.ri.reagentlot

Class com.genologics.ri.reagentlot.ReagentKitLink

class ReagentKitLink extends Object implements Serializable

serialVersionUID:

-5659881404760243462L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.reagentlot.ReagentLot

class ReagentLot extends Object implements Serializable

serialVersionUID:

8414977581247533239L

Serialized Fields

createdBy

ResearcherLink createdBy

createdDate

Date createdDate

expiryDate

Date expiryDate

lastModifiedBy

ResearcherLink lastModifiedBy

lastModifiedDate

Date lastModifiedDate

limsid

String limsid

lotNumber

String lotNumber

name

String name

notes

String notes

reagentKit

ReagentKitLink reagentKit

status

Status status

storageLocation

String storageLocation

uri

URI uri

usageCount

Long usageCount

Since:

2.20

Class com.genologics.ri.reagentlot.ReagentLotLink

class ReagentLotLink extends Object implements Serializable

serialVersionUID:

-5668438563329514777L

Serialized Fields

limsid

String limsid

name

String name

The name of the Reagent Lot.

Since:

2.31

uri

URI uri

Class com.genologics.ri.reagentlot.ReagentLots

class ReagentLots extends Object implements Serializable

serialVersionUID:

-7760282244017305741L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

reagentLots

List<ReagentLotLink> reagentLots

uri

String uri

Class com.genologics.ri.reagentlot.ResearcherLink

class ResearcherLink extends Object implements Serializable

serialVersionUID:

-7080549970267921256L

Serialized Fields

uri

URI uri

Package com.genologics.ri.reagenttype

Class com.genologics.ri.reagenttype.Attribute

class Attribute extends Object implements Serializable

serialVersionUID:

-1114923515136408861L

Serialized Fields

name

String name

value

String value

Class com.genologics.ri.reagenttype.ReagentType

class ReagentType extends Object implements Serializable

serialVersionUID:

-7390347729777321516L

Serialized Fields

name

String name

reagentCategory

String reagentCategory

specialType

SpecialType specialType

uri

URI uri

Class com.genologics.ri.reagenttype.ReagentTypeLink

class ReagentTypeLink extends Object implements Serializable

serialVersionUID:

-628102520150401023L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.reagenttype.ReagentTypes

class ReagentTypes extends Object implements Serializable

serialVersionUID:

-3173542275521810830L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

reagentTypes

List<ReagentTypeLink> reagentTypes

Class com.genologics.ri.reagenttype.SpecialType

class SpecialType extends Object implements Serializable

serialVersionUID:

2227997075421321531L

Serialized Fields

attributes

List<Attribute> attributes

name

String name

Package com.genologics.ri.researcher

Class com.genologics.ri.researcher.Credentials

class Credentials extends Object implements Serializable

serialVersionUID:

-2712902822454057343L

Serialized Fields

accountLocked

Boolean accountLocked

password

String password

roles

List<Role> roles

username

String username

Class com.genologics.ri.researcher.LabLink

class LabLink extends Object implements Serializable

serialVersionUID:

-2199818978989305791L

Serialized Fields

uri

URI uri

Class com.genologics.ri.researcher.Researcher

class Researcher extends Object implements Serializable

serialVersionUID:

2552745292977587999L

Serialized Fields

credentials

Credentials credentials

email

String email

externalIds

List<ExternalId> externalIds

fax

String fax

fields

List<UDF> fields

firstName

String firstName

initials

String initials

lab

LabLink lab

lastName

String lastName

phone

String phone

type

UDT type

uri

URI uri

Class com.genologics.ri.researcher.ResearcherLink

class ResearcherLink extends Object implements Serializable

serialVersionUID:

5396333049575412661L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Class com.genologics.ri.researcher.Researchers

class Researchers extends Object implements Serializable

serialVersionUID:

1730166894555776245L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

researchers

List<ResearcherLink> researchers

Class com.genologics.ri.researcher.Role

class Role extends Object implements Serializable

serialVersionUID:

-4641418115009008515L

Serialized Fields

name

String name

Since:

2.19

roleName

String roleName

Deprecated.

Deprecated from version 2.19.

uri

URI uri

Since:

2.19

Package com.genologics.ri.role

Class com.genologics.ri.role.PermissionLink

class PermissionLink extends Object implements Serializable

serialVersionUID:

6570314965797232412L

Serialized Fields

action

String action

name

String name

uri

URI uri

Class com.genologics.ri.role.ResearcherLink

class ResearcherLink extends Object implements Serializable

serialVersionUID:

-8690537907678526381L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Class com.genologics.ri.role.Role

class Role extends Object implements Serializable

serialVersionUID:

5417064490465819346L

Serialized Fields

builtIn

Boolean builtIn

name

String name

permissions

List<PermissionLink> permissions

researchers

List<ResearcherLink> researchers

uri

URI uri

Class com.genologics.ri.role.RoleLink

class RoleLink extends Object implements Serializable

serialVersionUID:

-6515590246139208584L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.role.Roles

class Roles extends Object implements Serializable

serialVersionUID:

-8997233724026640778L

Serialized Fields

roles

List<RoleLink> roles

uri

URI uri

Package com.genologics.ri.routing

Class com.genologics.ri.routing.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

-5098969484639468234L

Serialized Fields

uri

URI uri

Class com.genologics.ri.routing.ExtArtifactAssignments

class ExtArtifactAssignments extends Object implements Serializable

serialVersionUID:

5445690350646421054L

Serialized Fields

artifacts

List<ArtifactLink> artifacts

stageUri

URI stageUri

workflowUri

URI workflowUri

Class com.genologics.ri.routing.Routing

class Routing extends Object implements Serializable

serialVersionUID:

4810146731548918326L

Serialized Fields

assignedRoutes

List<ExtArtifactAssignments> assignedRoutes

unassignedRoutes

List<ExtArtifactAssignments> unassignedRoutes

Package com.genologics.ri.sample

Class com.genologics.ri.sample.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

3393329302381963246L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.sample.BioSource

class BioSource extends Object implements Serializable

serialVersionUID:

-4781585129823907022L

Serialized Fields

description

String description

Deprecated.

fields

List<UDF> fields

Deprecated.

name

String name

Deprecated.

Class com.genologics.ri.sample.ControlTypeLink

class ControlTypeLink extends Object implements Serializable

serialVersionUID:

4125221399101385098L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.sample.ProjectLink

class ProjectLink extends Object implements Serializable

serialVersionUID:

-4874099265690719737L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.sample.Sample

class Sample extends SampleBase implements Serializable

serialVersionUID:

5852545940907097947L

Class com.genologics.ri.sample.SampleBase

class SampleBase extends Object implements Serializable

serialVersionUID:

7926341075019764297L

Serialized Fields

artifact

ArtifactLink artifact

bioSource

BioSource bioSource

Deprecated.

controlType

ControlTypeLink controlType

dateCompleted

Date dateCompleted

dateReceived

Date dateReceived

externalIds

List<ExternalId> externalIds

fields

List<UDF> fields

files

List<ClarityFile> files

limsid

String limsid

name

String name

project

ProjectLink project

submitter

Submitter submitter

type

UDT type

uri

URI uri

Class com.genologics.ri.sample.SampleBatchFetchResult

class SampleBatchFetchResult extends Object implements Serializable

serialVersionUID:

8207729034543316762L

Serialized Fields

sampleCreations

List<SampleCreation> sampleCreations

samples

List<Sample> samples

Class com.genologics.ri.sample.SampleCreation

class SampleCreation extends SampleBase implements Serializable

serialVersionUID:

8233679374775813938L

Serialized Fields

location

Location location

Class com.genologics.ri.sample.SampleLink

class SampleLink extends Object implements Serializable

serialVersionUID:

-5247716763134908401L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.sample.Samples

class Samples extends Object implements Serializable

serialVersionUID:

7481910467952402185L

Serialized Fields

nextPage

Page nextPage

previousPage

Page previousPage

samples

List<SampleLink> samples

Class com.genologics.ri.sample.Submitter

class Submitter extends Object implements Serializable

serialVersionUID:

1302200229944706575L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Package com.genologics.ri.stage

Class com.genologics.ri.stage.ProtocolLink

class ProtocolLink extends Object implements Serializable

serialVersionUID:

2132801688423667843L

Serialized Fields

uri

URI uri

Class com.genologics.ri.stage.ProtocolStepLink

class ProtocolStepLink extends Object implements Serializable

serialVersionUID:

-8628711111931596088L

Serialized Fields

uri

URI uri

Class com.genologics.ri.stage.Stage

class Stage extends Object implements Serializable

serialVersionUID:

-7190421220331989537L

Serialized Fields

index

Integer index

name

String name

protocol

ProtocolLink protocol

step

ProtocolStepLink step

uri

URI uri

workflow

WorkflowLink workflow

Class com.genologics.ri.stage.WorkflowLink

class WorkflowLink extends Object implements Serializable

serialVersionUID:

7790581332424089347L

Serialized Fields

uri

URI uri

Package com.genologics.ri.step

Class com.genologics.ri.step.Actions

class Actions extends Object implements Serializable

serialVersionUID:

-8235969313191790414L

Serialized Fields

configuration

StepConfiguration configuration

escalation

Escalation escalation

Since:

2.18

nextActions

List<NextAction> nextActions

step

Link step

uri

URI uri

Class com.genologics.ri.step.ActionsLink

class ActionsLink extends Object implements Serializable

serialVersionUID:

3468768301588893685L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.ArtifactLink

class ArtifactLink extends Object implements Serializable

serialVersionUID:

-3085489413319927673L

Serialized Fields

limsid

String limsid

outputGenerationType

OutputGenerationType outputGenerationType

type

OutputType type

uri

URI uri

Class com.genologics.ri.step.AutomaticNextStepLink

class AutomaticNextStepLink extends Object implements Serializable

serialVersionUID:

-7710114187126292590L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.AvailableProgram

class AvailableProgram extends Object implements Serializable

serialVersionUID:

-4101189878995002052L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.step.ContainerLink

class ContainerLink extends Object implements Serializable

serialVersionUID:

7495526539351739682L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.CreationInput

class CreationInput extends Object implements Serializable

serialVersionUID:

8275002091544701688L

Serialized Fields

controlTypeUri

URI controlTypeUri

replicates

Long replicates

uri

URI uri

Class com.genologics.ri.step.EscalatedArtifact

class EscalatedArtifact extends Object implements Serializable

serialVersionUID:

3942629848997667695L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.Escalation

class Escalation extends Object implements Serializable

serialVersionUID:

-7363821101050828859L

Serialized Fields

escalatedArtifacts

List<EscalatedArtifact> escalatedArtifacts

request

EscalationRequest request

review

EscalationReview review

Class com.genologics.ri.step.EscalationRequest

class EscalationRequest extends Object implements Serializable

serialVersionUID:

4381438520659390791L

Serialized Fields

author

UserLink author

comment

String comment

date

Date date

reviewer

UserLink reviewer

Class com.genologics.ri.step.EscalationReview

class EscalationReview extends Object implements Serializable

serialVersionUID:

-4529608991906508233L

Serialized Fields

author

UserLink author

comment

String comment

date

Date date

Class com.genologics.ri.step.Input

class Input extends Object implements Serializable

serialVersionUID:

-2525215280378480778L

Serialized Fields

replicates

Long replicates

Since:

2.18

uri

URI uri

Class com.genologics.ri.step.InputOutputMap

class InputOutputMap extends Object implements Serializable

serialVersionUID:

-6553131277891392216L

Serialized Fields

input

ArtifactLink input

output

ArtifactLink output

Class com.genologics.ri.step.InstrumentLink

class InstrumentLink extends Object implements Serializable

serialVersionUID:

-8476139725814009464L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.step.NextAction

class NextAction extends Object implements Serializable

serialVersionUID:

-8061858911629830727L

Serialized Fields

action

ActionType action

artifactUri

URI artifactUri

reworkStepUri

URI reworkStepUri

Since:

2.20

stepUri

URI stepUri

Class com.genologics.ri.step.Output

class Output extends Object implements Serializable

serialVersionUID:

-5292196293632912589L

Serialized Fields

artifactUri

URI artifactUri

reagentLabels

List<ReagentLabel> reagentLabels

Class com.genologics.ri.step.OutputPlacement

class OutputPlacement extends Object implements Serializable

serialVersionUID:

5187719712136408829L

Serialized Fields

location

Location location

uri

URI uri

Class com.genologics.ri.step.Placements

class Placements extends Object implements Serializable

serialVersionUID:

-1949893881292269955L

Serialized Fields

configuration

StepConfiguration configuration

outputPlacements

List<OutputPlacement> outputPlacements

selectedContainers

List<ContainerLink> selectedContainers

step

Link step

uri

URI uri

Class com.genologics.ri.step.PlacementsLink

class PlacementsLink extends Object implements Serializable

serialVersionUID:

2017533453426861528L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.PooledInputs

class PooledInputs extends Object implements Serializable

serialVersionUID:

-3807477794297469797L

Serialized Fields

inputs

List<Input> inputs

name

String name

outputUri

URI outputUri

Class com.genologics.ri.step.Pools

class Pools extends Object implements Serializable

serialVersionUID:

5682428399776236959L

Serialized Fields

availableInputs

List<Input> availableInputs

configuration

StepConfiguration configuration

pooledInputs

List<PooledInputs> pooledInputs

step

Link step

uri

URI uri

Class com.genologics.ri.step.PoolsLink

class PoolsLink extends Object implements Serializable

serialVersionUID:

130181334136851112L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.ProcessStep

class ProcessStep extends Object implements Serializable

serialVersionUID:

2856981733241902872L

Serialized Fields

actions

ActionsLink actions

automaticNextStep

AutomaticNextStepLink automaticNextStep

Since:

2.22

availablePrograms

List<AvailableProgram> availablePrograms

Since:

2.18

configuration

StepConfiguration configuration

currentState

ProcessState currentState

Now an enumeration since release 2.31.3 of the client.

Since:

2.18

dateCompleted

Date dateCompleted

Since:

2.22

dateStarted

Date dateStarted

Since:

2.22

details

StepDetailsLink details

Since:

2.18

limsid

String limsid

placements

PlacementsLink placements

pools

PoolsLink pools

programStatus

ProgramStatusLink programStatus

reagentLots

ReagentLotsLink reagentLots

Since:

2.18

reagents

ReagentsLink reagents

setup

StepSetupLink setup

Since:

2.18

uri

URI uri

Class com.genologics.ri.step.ProgramStatus

class ProgramStatus extends Object implements Serializable

serialVersionUID:

-3133977224031042653L

Serialized Fields

configuration

StepConfiguration configuration

message

String message

status

Status status

step

Link step

uri

URI uri

Class com.genologics.ri.step.ProgramStatusLink

class ProgramStatusLink extends Object implements Serializable

serialVersionUID:

1364271013485882177L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.ReagentLabel

class ReagentLabel extends Object implements Serializable

serialVersionUID:

-5256319945578711720L

Serialized Fields

name

String name

Class com.genologics.ri.step.ReagentLotLink

class ReagentLotLink extends Object implements Serializable

serialVersionUID:

-5183820950832194933L

Serialized Fields

limsid

String limsid

uri

URI uri

Class com.genologics.ri.step.ReagentLots

class ReagentLots extends Object implements Serializable

serialVersionUID:

27145430586603574L

Serialized Fields

configuration

StepConfiguration configuration

reagentLots

List<ReagentLotLink> reagentLots

step

Link step

uri

URI uri

Class com.genologics.ri.step.ReagentLotsLink

class ReagentLotsLink extends Object implements Serializable

serialVersionUID:

-2260570956329971986L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.Reagents

class Reagents extends Object implements Serializable

serialVersionUID:

4896945008573422890L

Serialized Fields

configuration

StepConfiguration configuration

outputReagents

List<Output> outputReagents

reagentCategory

String reagentCategory

step

Link step

uri

URI uri

Class com.genologics.ri.step.ReagentsLink

class ReagentsLink extends Object implements Serializable

serialVersionUID:

606802593515729159L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.SharedResultFile

class SharedResultFile extends Object implements Serializable

serialVersionUID:

-1481534271853089634L

Serialized Fields

artifactUri

URI artifactUri

limsid

String limsid

message

String message

name

String name

sharedResultFileIndex

String sharedResultFileIndex

Class com.genologics.ri.step.StepConfiguration

class StepConfiguration extends Object implements Serializable

serialVersionUID:

7902167896883448736L

Serialized Fields

protocolStepUri

URI protocolStepUri

stepName

String stepName

Class com.genologics.ri.step.StepCreation

class StepCreation extends Object implements Serializable

serialVersionUID:

3624008363559662022L

Serialized Fields

configuration

StepConfiguration configuration

containerType

String containerType

inputs

List<CreationInput> inputs

reagentCategory

String reagentCategory

Class com.genologics.ri.step.StepDetails

class StepDetails extends Object implements Serializable

serialVersionUID:

5865493881321340964L

Serialized Fields

configuration

StepConfiguration configuration

fields

List<UDF> fields

inputOutputMaps

List<InputOutputMap> inputOutputMaps

instrument

InstrumentLink instrument

preset

String preset

step

Link step

uri

URI uri

Class com.genologics.ri.step.StepDetailsLink

class StepDetailsLink extends Object implements Serializable

serialVersionUID:

-3461183102550868643L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.StepSetup

class StepSetup extends Object implements Serializable

serialVersionUID:

1161115098255552451L

Serialized Fields

configuration

StepConfiguration configuration

files

List<SharedResultFile> files

step

Link step

uri

URI uri

Class com.genologics.ri.step.StepSetupLink

class StepSetupLink extends Object implements Serializable

serialVersionUID:

2029094616401964710L

Serialized Fields

uri

URI uri

Class com.genologics.ri.step.UserLink

class UserLink extends Object implements Serializable

serialVersionUID:

-682022057659965784L

Serialized Fields

firstName

String firstName

lastName

String lastName

uri

URI uri

Package com.genologics.ri.stepconfiguration

Class com.genologics.ri.stepconfiguration.ControlTypeLink

class ControlTypeLink extends LockableSetting implements Serializable

serialVersionUID:

-6200561684960024319L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.stepconfiguration.EppTrigger

class EppTrigger extends LockableSetting implements Serializable

serialVersionUID:

8850458905996420686L

Serialized Fields

name

String name

point

TriggerPoint point

status

TriggerStatus status

type

TriggerType type

Class com.genologics.ri.stepconfiguration.Field

class Field extends LockableSetting implements Serializable

serialVersionUID:

2627702301901466857L

Serialized Fields

attachTo

String attachTo

name

String name

style

Style style

Since:

2.23

Class com.genologics.ri.stepconfiguration.GenericTypeLink

class GenericTypeLink extends Object implements Serializable

serialVersionUID:

-7599295833392440499L

Serialized Fields

locked

Boolean locked

value

String value

Class com.genologics.ri.stepconfiguration.IceBucketField

class IceBucketField extends Field implements Serializable

serialVersionUID:

-2716908183459254115L

Serialized Fields

detail

Boolean detail

Class com.genologics.ri.stepconfiguration.LockableSetting

class LockableSetting extends Object implements Serializable

serialVersionUID:

1977151383272159438L

Serialized Fields

locked

Boolean locked

Class com.genologics.ri.stepconfiguration.NextStep

class NextStep extends Object implements Serializable

serialVersionUID:

-955680094983735241L

Serialized Fields

name

String name

nextStepUri

URI nextStepUri

sequence

Integer sequence

Class com.genologics.ri.stepconfiguration.ProcessTypeLink

class ProcessTypeLink extends Object implements Serializable

serialVersionUID:

8671368236853188031L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.stepconfiguration.ProtocolStep

class ProtocolStep extends Object implements Serializable

serialVersionUID:

496185986542798015L

Serialized Fields

defaultGrouping

GenericTypeLink defaultGrouping

Deprecated.

Since:

2.18

eppTriggers

List<EppTrigger> eppTriggers

iceBucketFields

List<IceBucketField> iceBucketFields

Since:

2.25

name

String name

permittedContainerTypes

List<GenericTypeLink> permittedContainerTypes

permittedControlTypes

List<ControlTypeLink> permittedControlTypes

permittedInstrumentTypes

List<GenericTypeLink> permittedInstrumentTypes

Since:

2.25

permittedReagentCategories

List<GenericTypeLink> permittedReagentCategories

processType

ProcessTypeLink processType

protocolStepIndex

Integer protocolStepIndex

protocolUri

URI protocolUri

queueFields

List<QueueField> queueFields

requiredReagentKits

List<ReagentKitLink> requiredReagentKits

Since:

2.18

sampleFields

List<Field> sampleFields

stepFields

List<Field> stepFields

stepProperties

List<StepProperty> stepProperties

stepSetup

StepSetup stepSetup

transitions

List<NextStep> transitions

uri

URI uri

Class com.genologics.ri.stepconfiguration.QueueField

class QueueField extends Field implements Serializable

serialVersionUID:

-3020055581011697956L

Serialized Fields

detail

Boolean detail

Class com.genologics.ri.stepconfiguration.ReagentKitLink

class ReagentKitLink extends LockableSetting implements Serializable

serialVersionUID:

-6108166879985602695L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.stepconfiguration.SharedResultFile

class SharedResultFile extends Object implements Serializable

serialVersionUID:

5837529395773779245L

Serialized Fields

message

String message

sharedResultFileIndex

String sharedResultFileIndex

Class com.genologics.ri.stepconfiguration.StepProperty

class StepProperty extends LockableSetting implements Serializable

serialVersionUID:

-4406681767879834495L

Serialized Fields

name

String name

value

String value

Class com.genologics.ri.stepconfiguration.StepSetup

class StepSetup extends LockableSetting implements Serializable

serialVersionUID:

3706069288148584102L

Serialized Fields

enabled

boolean enabled

files

List<SharedResultFile> files

Package com.genologics.ri.userdefined

Exception com.genologics.ri.userdefined.MissingUDFException

class MissingUDFException extends RuntimeException implements Serializable

serialVersionUID:

-4554179841298001722L

Serialized Fields

name

String name

Class com.genologics.ri.userdefined.UDF

class UDF extends Object implements Serializable

serialVersionUID:

-3019516615900521203L

Serialized Fields

name

String name

type

FieldType type

unit

String unit

value

String value

Class com.genologics.ri.userdefined.UDT

class UDT extends Object implements Serializable

serialVersionUID:

-6550385282803073762L

Serialized Fields

fields

List<UDF> fields

name

String name

Package com.genologics.ri.version

Class com.genologics.ri.version.Version

class Version extends Object implements Serializable

serialVersionUID:

-28598435711579586L

Serialized Fields

major

String major

minor

String minor

uri

URI uri

Class com.genologics.ri.version.Versions

class Versions extends Object implements Serializable

serialVersionUID:

-1555363240810423322L

Serialized Fields

versions

List<Version> versions

Package com.genologics.ri.workflowconfiguration

Class com.genologics.ri.workflowconfiguration.ProtocolLink

class ProtocolLink extends Object implements Serializable

serialVersionUID:

2721431278437928217L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.workflowconfiguration.StageLink

class StageLink extends Object implements Serializable

serialVersionUID:

-2216914758853864373L

Serialized Fields

name

String name

uri

URI uri

Class com.genologics.ri.workflowconfiguration.Workflow

class Workflow extends Object implements Serializable

serialVersionUID:

-8884000036888230246L

Serialized Fields

name

String name

protocols

List<ProtocolLink> protocols

stages

List<StageLink> stages

status

Status status

uri

URI uri

Class com.genologics.ri.workflowconfiguration.WorkflowLink

class WorkflowLink extends Object implements Serializable

serialVersionUID:

1335890809720204629L

Serialized Fields

name

String name

status

Status status

uri

URI uri

Class com.genologics.ri.workflowconfiguration.Workflows

class Workflows extends Object implements Serializable

serialVersionUID:

-7678105241108473919L

Serialized Fields

workflows

List<WorkflowLink> workflows

Package org.cruk.clarity.api

Exception org.cruk.clarity.api.ClarityException

class ClarityException extends RuntimeException implements Serializable

serialVersionUID:

404952616991787238L

Serialized Fields

category

String category

code

String code

httpStatus

HttpStatus httpStatus

suggestedActions

String suggestedActions

Exception org.cruk.clarity.api.ClarityUpdateException

class ClarityUpdateException extends RuntimeException implements Serializable

serialVersionUID:

-2679585761524242033L

Exception org.cruk.clarity.api.IllegalSearchTermException

class IllegalSearchTermException extends IllegalArgumentException implements Serializable

serialVersionUID:

-1008444394159250460L

Serialized Fields

searchTerm

String searchTerm

Search term.

Exception org.cruk.clarity.api.InvalidURIException

class InvalidURIException extends IllegalArgumentException implements Serializable

serialVersionUID:

6541624754969322769L

Package org.cruk.clarity.api.automation

Exception org.cruk.clarity.api.automation.ClarityAutomationException

class ClarityAutomationException extends RuntimeException implements Serializable

serialVersionUID:

1609079834226439767L